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1.
Article in English | IMSEAR | ID: sea-44676

ABSTRACT

The aim of this study was to investigate the distribution of human leukocyte antigens (HLA) -E alleles in Thailand. HLA-E alleles were assigned by using a polymerase chain reaction-sequence specific oligonucleotide probes (PCR-SSOP) method and direct sequencing in 200 healthy individuals. They comprised 100 Thai, 50 Chinese and 50 Thai-Chinese. From the results, three alleles of HLA-E could be detected in these populations. The E*0101 was the most common allele in Thai and Thai-Chinese with allelic frequencies of 42.5 per cent and 38 per cent, respectively. The other HLA-E allele frequencies of Thai origin were 33 per cent for E*01031 and 24.5 per cent for E*01032, respectively. Among Thai-Chinese, the allele frequencies of HLA-E were 31 per cent for E*01031 and E*01032, respectively. Whereas, the E*01031 was the predominant allele in Chinese origin with a frequency of 39 per cent, followed by E*0101 and E*01032 with 32 per cent and 29 per cent, respectively. No E*01033, E*0102 and E*0104 could be detected in all individuals. When comparing the distribution of HLA-E alleles between each of the populations (Thai vs Chinese, Thai vs Thai-Chinese and Chinese vs Thai-Chinese), no significant difference could be found among these populations. In addition, there was no significant difference of the distribution of HLA-E alleles between the study populations and other populations from Asian countries, reported previously. However, there were significant differences between the populations (Thai, Chinese and Thai-Chinese) and Danish (chi2 = 15.64, p = 0.0004; chi2 = 24.58, p = 0.0000046; chi2 = 14.69, p = 0.00065, respectively).


Subject(s)
Adolescent , Adult , Gene Frequency/genetics , HLA Antigens/genetics , Humans , Middle Aged , Molecular Probe Techniques , Polymerase Chain Reaction , Reference Values , Thailand
2.
Article in English | IMSEAR | ID: sea-40036

ABSTRACT

OBJECTIVE: To study the distribution of human leukocyte antigens (HLA) -A and -B antigens by standard microlymphocytotoxicity assay in Thai nasopharyngeal carcinoma (NPC) patients compared to normal controls in order to identify the alleles associated with NPC in Thailand. DESIGN: Retrospective-Analytical study. SUBJECTS: Fifty-three unrelated Thai patients with histologically confirmed NPC diagnosed at King Chulalongkorn Memorial Hospital and 70 healthy unrelated Thai individuals served as controls. METHOD: Lymphocyte separation and HLA typing were performed from freshly drawn blood by standard microlymphocytotoxicity assay. The significance of differences between the two groups was analyzed by the chi-square test. RESULTS: HLA-A2 was observed at a greater frequency in patients being found in 31/53 (58%) NPC patients compared to 27/70 (38%) controls (p = 0.02). An increase in HLA-B46 was also demonstrated. HLA-B46 was present in 16/53 (30%) NPC patients but was observed in 10/70 (14%) in controls (p = 0.03). CONCLUSIONS: This study reported two susceptible, HLA-A2 and HLA-B46 antigens, for NPC in a Thai population.


Subject(s)
Adolescent , Adult , Aged , Aged, 80 and over , Carcinoma/blood , Female , Gene Frequency/genetics , HLA-A Antigens/blood , HLA-B Antigens/blood , Humans , Male , Middle Aged , Nasopharyngeal Neoplasms/blood , Thailand
3.
Article in English | IMSEAR | ID: sea-44526

ABSTRACT

A large outbreak of group A Streptococcus (GAS) pharyngitis occurred among 285 cadets at the Chulachomklao Royal Military Academy, Nakhon Nayok between September 22 and 27, 1996. An epidemiologic investigation was conducted to determine the source of infection. It seemed that respiratory droplets were the mechanism of spread, although foodborne transmission could not be excluded. To assess the presence of the outbreak strain in the community, conventional serotyping and molecular typing by emm sequencing were performed. The results demonstrated the advantage of molecular typing compared to serotyping and suggested that the outbreak was caused by the same strain. Interestingly, the involvement of the causative emm79 strain, which is an uncommon type of GAS disease, in a large number of patients may imply the invasive potential of this organism.


Subject(s)
Adolescent , Adult , Amino Acid Sequence , Base Sequence , Disease Outbreaks , Humans , Incidence , Male , Military Personnel , Molecular Sequence Data , Pharyngitis/epidemiology , Polymerase Chain Reaction , Surveys and Questionnaires , Serotyping , Streptococcal Infections/diagnosis , Streptococcus pyogenes/isolation & purification , Thailand/epidemiology
4.
Article in English | IMSEAR | ID: sea-38876

ABSTRACT

Emm (M protein gene) typing was used to analyze group A streptococcal (GAS) clinical isolates in Thailand from in-patients at Chulalongkorn University Hospital (CUH) between January 1, 1995 and December 31, 1999. Forty GAS isolates were recovered from blood and other sterile sites from 40 patients presenting with different types of infections. A variety of emm sequences (24 types) have been reported in this study including the identification of 2 novel emm variants demonstrating the diverse population of invasive GAS isolates in Thailand. The common emm types include emm1 (5 isolates, 12.5%), emm22 (4 isolates, 10%), emm25 (3 isolates, 7.5%), emm61 (3 isolates, 7.5%), and STNS1033 (3 isolates, 7.5%). No particular emm types of GAS tend to be frequently associated with specific clinical presentation, complication, or anatomic site of infection. This report provides epidemiological information from Thailand where streptococcal infections and their sequelae are important public health problems. In addition, the results are useful for the development of a suitable M protein based vaccine in the future.


Subject(s)
Adolescent , Adult , Age Distribution , Aged , Aged, 80 and over , Bacteremia/epidemiology , Base Sequence , Child , DNA, Bacterial/analysis , Female , Genetic Variation , Hospitals, Community , Humans , Incidence , Male , Middle Aged , Molecular Sequence Data , Polymerase Chain Reaction , Risk Factors , Sex Distribution , Streptococcal Infections/epidemiology , Streptococcus pyogenes/genetics , Thailand/epidemiology
5.
Article in English | IMSEAR | ID: sea-40426

ABSTRACT

Rheumatoid arthritis (RA) in a Thai population is significantly associated with HLA-DR4. The frequency of DR4 was 43 per cent in RA patients and 20 per cent in the healthy controls (p = 0.00008, OR = 3.06, 95% CI = 1.71, 5.52). To analyze which DR4 alleles were associated with the disease, the authors subtyped 52 DR4-positive RA patients compared to 28 DR4-positive healthy controls by amplification with DR4-specific primers followed by direct sequencing. Six DR4 alleles (DRB1*0401, *0403, *0404, *0405, *0406, and *0410) were found in the RA patient group while 5 alleles (DRB1*0401, *0403, *0405, *0406, and *0407) were found in the control group. Both groups were predominated by DRB11*0405, but there was a significant increase in the frequency of DRB1*0405 in DR4+ RA patients compared to DR4+ healthy controls (84.6% vs 46.4%, p = 0.0008, OR = 6.35, 95% CI = 1.96, 21.08). DR4 which shared epitope alleles (DRB1*0401, *0404, *0405) were observed in 47 (90.3%) DR4+ patients and 15 (53.5%) DR4+ controls (p = 0.0005, OR = 8.15, 95% CI = 2.29, 33.2). In addition, the authors found that DRB1*0403 was significantly decreased in DR4+ RA patients compared to controls (p = 0.0065, OR = 0.07, 95% CI = 0, 0.67).


Subject(s)
Adult , Age Distribution , Aged , Alleles , Arthritis, Rheumatoid/epidemiology , Case-Control Studies , Chi-Square Distribution , Confidence Intervals , Epitope Mapping , Female , Genetic Predisposition to Disease/epidemiology , HLA-DR4 Antigen/analysis , Humans , Incidence , Male , Middle Aged , Odds Ratio , Reference Values , Risk Factors , Sampling Studies , Sex Distribution , Thailand/epidemiology
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